TRACK (Tandem Repeat Analysis and Comparison Kit)
Snakemake workflow designed to identify and compare tandem repeats (TRs) across species, and genotype catalogs in population-wide data. (de Lima Adam et al. 2025)
py_ped_sim
Simulates pedigrees with genetic variation given varying sibship sizes and rates of misattributed paternity (Guardado et al. 2025)
Updated R package for EVE (Expression Variance and Evolution)
Implements the phylogenetic ANOVA test for expression divergence and diversity, as well as a test for branch-specific expression shifts, can account for technical variance in expression estimates. (Gillard et al. 2021)
Original EVE (Expression Variance and Evolution)
Implements the phylogenetic ANOVA test for expression divergence and diversity, as well as a test for branch-specific expression shifts. (Rohlfs and Nielsen 2015)
Snakemake workflow designed to identify and compare tandem repeats (TRs) across species, and genotype catalogs in population-wide data. (de Lima Adam et al. 2025)
py_ped_sim
Simulates pedigrees with genetic variation given varying sibship sizes and rates of misattributed paternity (Guardado et al. 2025)
Updated R package for EVE (Expression Variance and Evolution)
Implements the phylogenetic ANOVA test for expression divergence and diversity, as well as a test for branch-specific expression shifts, can account for technical variance in expression estimates. (Gillard et al. 2021)
Original EVE (Expression Variance and Evolution)
Implements the phylogenetic ANOVA test for expression divergence and diversity, as well as a test for branch-specific expression shifts. (Rohlfs and Nielsen 2015)
